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Thread: advanced genetics

  1. #1

    advanced genetics

    jack is a very smart men who loves inbreeding and says it is the only way to breed but i can show multiple scientific journal articles that somewhat disagree i recommend everyone go to the site for the institute of canine biology and learn about estimated breeding values and inbreeding coefficients and genetic diversity. no these are not the scientific journal articles i speak of but those can be found on google scholar and some are even about the APBT. now inbreeding coefficients are pretty much useless unless you go back a good number of generations like this site allows.

    I will let everyone in on a little secret on why we do not see many inbreeding defects in our working dogs and it has to do with genetic diversity. Now jack is right when he says inbreeding causes nothing but brings out what is already there but he conveniently leaves out that the more you inbreed the less genetic diversity you have when it comes to the genes. now inbreeding/linebreeding is a great tool when used correctly but one cannot inbreed for ever like he says without seeing serious problems.

    genetic disorders or traits that are caused by simple recessives can be set or gotten rid of by inbreeding and selecting against or for certain traits but when you have traits good or bad that are polygenic it is not as easy to rid them from the gene pool or set them if they are good

    most animal behaviours are caused by polygenic traits for example hunting traits in hunting dogs such as german shorthaired pointers or as i suspect gameness in our dogs.

    inbreeding alone does not cause a loss of genetic diversity but inbreeding combined with what is called popular sire syndrome and using only one or two offspring each generation of that popular sire.

    take a producer like jeep for example. let's say for example jeep was a carrier of a genetic trait that was not wanted by breeders. now as a carrier he would not express this trait himself. in fact in order for it to be expressed he would have to be bred to another carrier or another dog that expressed it. say this trait was fairly uncommon. then let's say you breed jeep 40 or 50 times like he was and a fairly uncommon trait becomes widely spread throughout the whole line and is almost near impossible to rid the line of this trait add on top of that that say only a couple sons of his were used to breed it would make it even worse thankfully as breeders of the APBT we all have our favorite lines sires dams offspring and the like and our genetic diversity is actually pretty good.

    Another thing to study is heredity. now heredity is not that percentage of a trait being passed down it is the percentage of the varying degrees of a trait in a population. for instance gameness i believe has varying degrees from complete cur to dead game and everywhere inbetween. heredity takes into consideration genetics plus environment or nature vs nurture if you will. the problem with a lot of people is they believe that it has to be one or the other when in reality it is a combination of the two added together. an example is say a trait is moderately heritable which most behavioural traits are then selection for said trait will be successful as long as you breed for it and take into account environment. i say all this to say that if the inbreeding coefficient is skewed in one way or the other it can make a breeding look like an outcross when in reality it is line bred .

    Heredity values are expressed from 0 to 1. 0 meaning no genes involved and only environment and 1 meaning 100 percent genetic involvement most behavioural traits fall in the moderately heritable range which is somewhere like 0.3 or 0.4. a trait being moderately heritable suggests that selecting for that trait will have an effect on the future stock.

    Another interesting subject is estimated breeding values (ebv). there is an actual equation for both heredity and ebv but i doubt any scientist is willing to measure the traits of the APBT for us to find out. so the bet we can do with ebv is look at part of how they figure the equation out. basically when selecting a stud for let's just make this simple and choose on trait. i will choose gameness. ebv also explain the age old question of why curs produce gamedogs and why gamedogs produce curs. so here it goes when selecting the best stud to pass on gameness you want to look for a stud that first himself expresses the trait. this is the first step but not the only one. say for instance the stud possesses the trait you want and he has 4 other siblings and none of them carry this trait the mother and father don't carry the trait and the aunts and uncles don't either but the great great grandfather does. the dog in this scenario is not a good stud choice because clearly the genes for the trit you are looking for are not strong in this particular strain of let's say the eli line another scenario you could have is you happen to own a stud who does not carry the trait you want but you know that 3 out of his 4 siblings do his father does 4 of the mothers siblings do and both grandparents do. this dog is a much better candidate for breeding than the first dog. is he the ideal stud? no but still a better choice than the first dog. the best choice would be the same as the second dog accept this dog also carries the trait you are looking for.

  2. #2
    Very interesting read, thanks for sharing bolero.

  3. #3
    Interesting. I love the Institute of Canine Biology site and their free courses!

  4. #4
    Bolero, can you explain in greater detail why you think our dogs can withstand such high COIs without showing major genetic defects?

  5. #5
    Because of selection and proofing the end product.

    Most of the scientific information involved around breeding is based on show dogs, some hunting stuff but the closest performance related would be horses. That information is a little off because they do not have litters. There is far less subjects to be in comparison.

    There are no double blind studies in regards to gameness, its definition or its preservation. The bulldog guy must take that information and apply it the best he can and usually that will fall on personal experience. And that personal experience is normally within a line or within a family.

    I agree with the last part. I mentioned a dog I have in an earlier post. His sister has won. His brother, although with limited skills, he was skull drug. His mother won and his sire was a crazy ass red Boy dog that would scratch to a sign post. All of his family started up early and were 'grown' before they were mature. My dog in turn, cold as ice. Zero interest.

    If I did not have access to his brother that possess the traits I am looking for, I would take a chance on the cold dog because everything in and around him could be taken up and down the road. Just like the heredity and traits part of the Canine Biology reads, I would not want to also breed one of his sons that turned out cold (if he were bred)

    The hard part of the science is factoring in personal experience as science had no room for personal experience, personal preference or subjective variables. Gameness being one. Most will agree it comes in varying degrees. Those degrees are subjectively defined.

    Another example from the Bolero family is Two Eyes. Many will say Bandit quit. I'm thankful he was bred and in the breeding to Bolero popped out Two Eyes. Two Eyes to Loca made an exceptional bitch in Miss Two Eyes. Miss Two Eyes when bred to Patrick's Kasai made my Cornbread and Chloe dogs. Chloe like her mom was methodical and smart and broke things down and then showed finish. Cornbread on the other hand was the happiest dog to ever be in a box. He needed two keeps. One for him to be in shape and then an extra keep because of his wagging tail. He absolutely enjoyed working.

    Bandit to Bolero was not exactly inbreeding or line breeding. Two Eyes to Loca not so much either. Miss Two Eyes to Kasai was a complete outcross. The quality was high and the percentages were high.

    Not to but in, as I am looking for Bolero's response as well, but I think the answer is selection and proofing.

    EWO

  6. #6
    Another great post EWO. And to touch on the bandit bolero breeding a bit. to me it was a family breeding around rascal and oso negro who were brothers. if you remember i believe amos is out of rascal LOL and if you look at loca who is a panther dog which panther is mainly a zebo family dog with some eli in there and look at the bottom side of boleros top and bottom you will see why it clicked,

    and like EWO said all of this info does not always translate to bulldogs because there are no studies done on bulldogs although there were two studies done about there genetic diversity. one was a study on a kennel in italy and another a kennel in russia they can be found through google.

    I believe the high COI in our dogs and no defects is because there were many founders of our dogs who were all bred differently. and were mixed differently. i dont beleive all the founder dogs were straight bulldog and terier crosses some were 75/25 both ways some were 50/50. then take into account like EWO said our dogs are working dogs. plus we have so many different people breeding the same families with there twist on the end product it keeps the diversity up.

  7. #7
    Good stuff, thanks guys. The more I learn about bulldogs, the more I'm amazed.

  8. #8
    A good book to read is animal breeding plans by jay lush and another book which you can read on kindle is genetics and the social behaviour of dogs. Now like EWO says non of the info is on bulldogs but i believe it still pertains to working dogs as a whole, but you can read all the books you want if you are not able read dogs and have your own experiences it really wont matter

  9. #9
    Quote Originally Posted by EWO View Post
    Because of selection and proofing the end product.

    Most of the scientific information involved around breeding is based on show dogs, some hunting stuff but the closest performance related would be horses. That information is a little off because they do not have litters. There is far less subjects to be in comparison.

    There are no double blind studies in regards to gameness, its definition or its preservation. The bulldog guy must take that information and apply it the best he can and usually that will fall on personal experience. And that personal experience is normally within a line or within a family.

    I agree with the last part. I mentioned a dog I have in an earlier post. His sister has won. His brother, although with limited skills, he was skull drug. His mother won and his sire was a crazy ass red Boy dog that would scratch to a sign post. All of his family started up early and were 'grown' before they were mature. My dog in turn, cold as ice. Zero interest.

    If I did not have access to his brother that possess the traits I am looking for, I would take a chance on the cold dog because everything in and around him could be taken up and down the road. Just like the heredity and traits part of the Canine Biology reads, I would not want to also breed one of his sons that turned out cold (if he were bred)

    The hard part of the science is factoring in personal experience as science had no room for personal experience, personal preference or subjective variables. Gameness being one. Most will agree it comes in varying degrees. Those degrees are subjectively defined.

    Another example from the Bolero family is Two Eyes. Many will say Bandit quit. I'm thankful he was bred and in the breeding to Bolero popped out Two Eyes. Two Eyes to Loca made an exceptional bitch in Miss Two Eyes. Miss Two Eyes when bred to Patrick's Kasai made my Cornbread and Chloe dogs. Chloe like her mom was methodical and smart and broke things down and then showed finish. Cornbread on the other hand was the happiest dog to ever be in a box. He needed two keeps. One for him to be in shape and then an extra keep because of his wagging tail. He absolutely enjoyed working.

    Bandit to Bolero was not exactly inbreeding or line breeding. Two Eyes to Loca not so much either. Miss Two Eyes to Kasai was a complete outcross. The quality was high and the percentages were high.

    Not to but in, as I am looking for Bolero's response as well, but I think the answer is selection and proofing.

    EWO
    I always noticed that down the line breeding to cold dogs produce one or two down the line
    I am not a fan on it , but it depends on the size of the yard I guess , some can gamble a bit more than others
    I breed every 2 or 3 years one litter i cannot afford thos kind of gambles

  10. #10
    Quote Originally Posted by bulldoghistorian View Post
    I always noticed that down the line breeding to cold dogs produce one or two down the line
    I am not a fan on it , but it depends on the size of the yard I guess , some can gamble a bit more than others
    I breed every 2 or 3 years one litter i cannot afford thos kind of gambles
    there really is no reason to take the gamble. but it is more of a gamble to breed to a game dog who has cur siblings and who is out of curs who are also out of curs

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